RSAT::Plants updated (Dec2022)

Hi, 

if you use the Plants server of the Regulatory Sequence Analysis Tools (RSAT), you might want to know that it has just been updated. Here's a short summary of the changes:

• The updated URL is https://rsat.eead.csic.es/plants
•  It now supports HTTPS connections powered by certbot
•  It now uses the source code at https://github.com/rsa-tools/rsat-code (I have updated some documentation along the way)
•  Nine new species have been imported from Ensembl Plants: Lolium perenne, Brassica juncea, Echinochloa crusgalli, Digitaria exilis, Vigna unguiculata, Brassica rapa ro18, Corylus avellana, Ficus carica, Lactuca sativa
•  One species renamed: Physcomitrium patens
•  Three updated with a new assembly: Vitis vinifera, Triticum urartum, sunflower
• This leaves the total number of supported assemblies in 100; you can see their stats at https://rsat.eead.csic.es/plants/data/stats
• Most species now correspond to release 55 of Ensembl Plants, but note that the sequence data is unchanged in many cases. This means that, for instance, that Hordeum_vulgare.MorexV3_pseudomolecules_assembly.52 becomes        Hordeum_vulgare.MorexV3_pseudomolecules_assembly.55, but the sequence is exactly the same.         
  

  

Have a nice break,

Bruno