I want to introduce you the new bioinformatic contribution of our lab to the science world: footprintDB (http://floresta.eead.csic.es/footprintdb/)
footprintDB is a database with 2905 unique DNA-binding proteins (mostly transcription factors, TFs) and 4001 DNA-binding motifs extracted from the literature and other repositories.
The binding interfaces of (most) proteins in the database are inferred from the collection of protein-DNA complexes described in 3D-footprint.
footprintDB predicts:
We encourage you to register in footprintDB and test it by yourself: http://floresta.eead.csic.es/footprintdb/index.php?user_register
footprintDB is a database with 2905 unique DNA-binding proteins (mostly transcription factors, TFs) and 4001 DNA-binding motifs extracted from the literature and other repositories.
The binding interfaces of (most) proteins in the database are inferred from the collection of protein-DNA complexes described in 3D-footprint.
footprintDB predicts:
- Transcription factors which bind a specific DNA site or motif
- DNA motifs likely to recognised by a specific DNA-binding protein
We encourage you to register in footprintDB and test it by yourself: http://floresta.eead.csic.es/footprintdb/index.php?user_register
