Hi,
3D-footprint, our database for the structural analysis of protein-DNA complexes, has been up and running since 2010 (see https://doi.org/10.1093/nar/gkp781). Due to a hardware failure it had been last updated in 2021. Finally we found the time to bring the system up to speed again, now in a Debian environment, and will be releasing new protein-DNA complexes from the PDB quarterly. We will also add the new content to footprintDB.
What's new?
- codebase is pretty much the same
- the URL is now https://floresta.eead.csic.es/3dfootprint
- the updated downloadables can be found at https://floresta.eead.csic.es/3dfootprint/download.html
- the original ineractive tool to analyze your own protein-DNA complexes has now been replaced with a Docker container at https://hub.docker.com/r/eeadcsiccompbio/dnaprot
That's all for today,
Bruno
