Hi, Carlos Cantalapiedra and me recently put together teaching material about scripting in the linux terminal.
The material can be found at repository https://github.com/eead-csic-compbio/scripting_linux_shell
There are five sessions and the goal is for you to learn the basics of the Linux shell and scripting for data sciences such as genomics and plant breeding:
session | title | required time | URL | |
---|---|---|---|---|
0 | Setup | prior to course | session 0 | |
1 | Linux basics and files | 2h | session 1 | |
2 | Processes and scripts | 2h | session 2 | |
3 | Parsing with regular expressions | 2h | session 3 | |
4 | Perl one-liners | 2h | session 4 | |
5 | Advanced scripts | 2h | session 5 |
Figure of the standard streams, taken from https://en.wikipedia.org/wiki/Standard_streams
If you spot errors please send pull requests, hope this helps some of you out there,
Bruno
PD si prefieres aprender en español echa un vistazo a https://github.com/vinuesa/intro2linux
https://asciinema.org/
ResponderEliminarhttps://github.com/sib-swiss/training-collection
ResponderEliminar